• J.Hunter, “Collaborative Semantic Tagging and Annotation Systems ”, chapter for “Annual Review of Information Science and Technology”, American Society for Information Science & Technology, Volume 43, 2009

• J.Hunter, S.Little, R.Schroeter, “The Application of Semantic Web Technologies to Multimedia Data Fusion within eScience”, invited book chapter for Springer “Semantic Multimedia and Ontologies: Theory and Applications”, Kompatsiaris, Yiannis; Hobson, Paola (Eds.) 2008

• J.Hunter, “Next Generation Metadata Tools – Supporting Dynamic Knowledge Spaces”, Chapter 6 of “Libr@ries: Changing Information Space and Practice”, Eds. C.Kapitzke and B.C.Bruce, Lawrence Erlbaum & Assoc. 2006

• J.Hunter, "The Role of Information Technologies in Indigenous Knowledge Management", Nakata, M. & Langton, M. Indigenous knowledge and libraries. Australian Academic & Researchers Libraries: Canberra, July 2005

• J.Hunter, "Adding Multimedia to the Semantic Web - Building and Applying an MPEG-7 Ontology", Chapter 3 of "Multimedia Content and the Semantic Web", Eds. Giorgos Stamou and Stefanos Kollias, Wiley, 2005

• J. Hunter, C.Seyrat, "The Description Definition Language", Chapter 4 of "Introduction to MPEG-7: Multimedia Content Description Interface", Eds. B.S. Manjunath, Philippe Salembier, Thomas Sikora, Wiley, June 2002

• A. Gerber and J.Hunter, "A Compound Object Authoring and Publishing Tool for Literary Scholars based on the IFLA-FRBR", International Journal of Digital Curation, Volume 4, Issue 2, pp 28-42, 2009.

• J.Hunter and A.Gerber, "Harvesting Community Annotations on 3D Models of Museum Artefacts to Enhance Knowledge, Discovery and Re-Use", Journal of Cultural Heritage, Volume 10, Issue 2, 2009.

• K.Cheung, J.Hunter and J.Drennan, "MatSeek: An Ontology-Based Federated Search Interface for Materials Scientists", IEEE Intelligent Systems, Volume 24, Issue 1, pp 47-56, January/February 2009.

• Androulakis, S., Schmidberger, J., Bate, M. A., DeGori, R., Beitz, A., Keong, C., Cameron, B., McGowan, S., Porter, C. J., Harrison, A., Hunter, J., Martin, J. L., Kobe, B., Dobson, R. C. J., Parker, M. W., Whisstock, J. C., Gray, J., Treloar, A., Groenewegen, D., Dickson, N. & Buckle, A. M. "Federated Repositories of X-ray Diffraction Images", Acta Crystallographica Section D: Biological Crystallography, 2008, Volume D64, pages 810-814

• J.Hunter and R.Schroeter, "Co-Annotea - A System for Semantically Tagging Relationships between Multiple Mixed-Media Digital Objects", (in press) IEEE Multimedia, Special Issue - Collaborative Tagging of Multimedia, 2008

• J.Hunter and K.Cheung, "Provenance Explorer - A Graphical Interface for Constructing Scientific Publication Packages from Provenance Trails", Special Issue - Digital Libraries and eScience, International Journal on Digital Libraries, Volume 7, Numbers 1-2, October 2007

• J.Hunter, M.Henderson, I.Khan, "Collaborative Annotation of 3D Crystallographic Models", ACS Journal of Chemical Information and Modeling (JCIM), Volume 47, No. 5 September 2007

• J. Curtis, P.Koerbin, P.Raftos, D.Berriman, J.Hunter, "AONS - An Obsolescence Detection and Notification Service for Web Archives and Digital Repositories", Special issue on Web Archiving, New Review on Hypermedia and Multimedia (JNRHM), Volume 13, Issue 1, January 2007

• J.Hunter, “Scientific Publication Packages – A Selective Approach to the Communication and Archival of Scientific Output”,  International Journal of Digital Curation Vol 1, December, 2006;

• K.Cheung and J.Hunter, “Provenance Explorer – Customized Provenance Views Using Semantic Inferencing”, Lecture Notes in Computer Science, The Semantic Web – ISWC 2006, Springer Berlin/Heidelberg, Volume 4273/2006, pp 215-227, November 2006

• J. Hunter, “The Shifting Landscape of Digital Libraries Research and Development in Australia”, ERCIM News, Vol 66, July 2006

• J.Hunter, S.Choudhury, “PANIC – An Integrated Approach to the Preservation of Composite Digital Objects using Semantic Web Services”, International Journal on Digital Libraries: Special Issue on Complex Digital Objects, Vol 6, Number 2, April 2006;

• J.Hunter, S.Little, "A Framework to enable the Semantic Inferencing and Querying of Multimedia Content", International Journal of Web Engineering and Technology (IJWET) Special Issue on the Semantic Web, Vol 2, Nos 2/3, 2005;

• J.Hunter, J.Drennan, S.Little, "Realizing the Hydrogen Economy through Semantic Web Technologies", IEEE Intelligent Systems - Special Issue on eScience, Jan-Feb 2004;

• J. Hunter, “Working Towards MetaUtopia - A Survey of Current Metadata Research”, Library Trends, Organizing the Internet, Edited by Andrew Torok, 52(2), Fall 2003

• M.Doerr, J.Hunter, C.Lagoze, “Towards a Core Ontology for Information Integration”, Journal of Digital Information, Volume 4 Issue 1, April 2003

• D.Rogers, J. Hunter, D. Kosovic, “The TV-Trawler Project“, International Journal of Imaging Systems and Technology, Special Issue on Multimedia Content Description and Video Compression, March 2003

• J. Hunter, “Enhancing the Semantic Interoperability of Multimedia through a Core Ontology“, IEEE Transactions on Circuits and Systems for Video Technology, Special Issue on Conceptual and Dynamical Aspects of Multimedia Content Description, Vol 13, Issue 1, Jan 2003

• C. Lagoze, J. Hunter, "The ABC Ontology and Model" (v3.0), Journal of Digital Information, Vol 2 , Issue 2, November 2001

• J. Hunter, “An Overview of the MPEG-7 Description Definition Language”, IEEE Transactions on Circuits and Systems for Video Technology, Special Issue on MPEG-7, Volume 11 Issue 6, June 2001

•  J. Hunter, “MetaNet - A Metadata Term Thesaurus to Enable Semantic Interoperability Between Metadata Domains”, Journal of Digital Information, Special Issue on Networked Knowledge Organization Systems, Volume 1, issue 8, April 2001

• J. Hunter, F. Nack, "An Overview of the MPEG-7 DDL Proposals", Signal Processing: Image Communication Journal, Special Issue on MPEG-7, Vol 16 pp 271-293, 2000

• J. Hunter, "MPEG-7: Behind the Scenes", D-lib Magazine, Vol 5 No 9, September 1999.

Peer-Reviewed Conference Papers

• C.Brooking, S.Shouldice, G.Robin, B.Kobe, J.L.Martin and J.Hunter, "Comparing METS and OAI-ORE for Encapsulating Scientific Data Products: A Protein Crystallography Case Study", IEEE eScience Conference, Oxford, Dec 9-11, 2009.

• A.Gerber and J.Hunter, "LORE: A Compound Object Authoring and Publishing Tool for Literary Scholars", Digital Humanities 09, University of Maryland, USA, June 22 - 25, 2009.

• A.Alabri, J.Hunter, C. Van Ingen and E. Abal "Health-e-Waterways: Dynamic Generation of Online Ecosystem Health Report Cards", 1st International Workshop on "Intelligent Systems for Environmental (Knowledge) Engineering and EcoInformatics, i-SEEK '09, Fukuoka, Japan, March 16-19, 2009.

• A. Alabri, J.Hunter, C. Van Ingen and E. Abal, "Data Integration for Smarter, Collaborative Whole-of-Water-Cycle Management", 8th International Conference on Hydroinformatics 2009. Conception, Chile, January 11 - 16, 2009.

• A.Newman, Y-F Li and J.Hunter, "Scalable Semantics - the Silver Lining of Cloud Computing", 4th IEEE International Conference on e-Science, Indianapolis, USA, Dec 7-12, 2008.

• A. Gerber and J.Hunter, "LORE: A Compound Object Authoring and Publishing Tool for the Australian Literature Studies Community", 11th International Conference on Asia-Pacific Digital Libraries (ICADL) 2008. Bali, Indonesia, December 2 - 5, 2008

• A. Gerber and J.Hunter, "A Compound Object Authoring & Publishing Tool for Literary Scholars based on IFLA-FRBR", 4th International Digital Curation Conference (IDCC) 2008. Edinburgh, Scotland, 1-3 December 2008.

• S.Ferndriger, A.Bernstein, J Song Dong, Y. Feng, Y-F Li, J.Hunter, "Enhancing Semantic Web Services with Inheritance", 7th International Semantic Web Conference, ISWC 2008, Karlsruhe, October 26-30, 2008.

• K.Cheung, J.Drennan, J.Hunter, "MatSeek – An Ontology-based Federated Search Interface for Materials Scientists", 21st International CODATA Conference, Kyiv, 5-8 October, 2008 .

• D. Kosovic, J. Hunter, "Implementing Preservation Services over the Storage Resource Broker (SRB)", iPRES 2008, The Fifth International Conference on Preservation of Digital Objects, London, September 29-30, 2008.

• J. Hunter, I.Khan, A.Gerber, "HarvANA - Harvesting Community Tags to Enrich Collection Metadata", ACM IEEE Joint Conference on Digital Libraries, JCDL 2008. Pittsburgh, PA, USA, June 16 - 20, 2008.

• A. Newman, J. Hunter, Y. F. Li, C. Bouton, M. Davis, "A Scale-Out RDF Molecule Store for Distributed Processing of Biomedical Data", HCLS Workshop at the 17th International World Wide Web Conference (WWW2008), Beijing, China, April 21-25, 2008

• J. Hunter, I. Khan, R. Chernich and A. Gerber, "Open Repositories 2.0: Harvesting Community Annotations to Enhance Discovery Services", Open Repositories Conference 2008 (OR2008). Southampton, UK. April 1 - 4, 2008

• K. Cheung, J. Drennan, J. Hunter, "Towards an Ontology for Data-driven Discovery of New Materials", Semantic Scientific Knowledge Integration AAAI/SSS Workshop, Stanford University, Mar 26-28, 2008

• A. Newman, J. Hunter, Y. F. Li, C. Bouton, M. Davis, "BioMANTA Ontology: The Integration of Protein-Protein Interaction Data", Interdisciplinary Ontology Conference, Tokyo, Feb 26-27, 2008.

• M. Davis, A. Newman, I. Khan, J. Hunter, M. A. Ragan, "Integrating Hierarchical Controlled Vocabularies with OWL Ontology: A Case Study from the Domain of Molecular Interactions", 6th Asia Pacific Bioinformatics Conference (APBC07), Kyoto, Jan 14-17, 2008

• B. Mauger, J. Hunter, J.Drennan, A. Wright, T. O'Hagan, "Building a Data Grid for the Australian Nanostructural Analysis Network", 3rd International Conference on eScience and Grid Computing (eScience07), Bangalore, Dec 10-13, 2007

• K. Cheung, J. Hunter, A. Lashtabeg, J. Drennan, "SCOPE - A Scientific Compound Object Publishing and Editing System", 3rd International Digital Curation Conference, Washington DC, Dec 11-13, 2007

• D. Pullar, J. F. Zhang, J. Hunter, X. Zhou, "Integrative Environmental Queries using Geospatial Web Services", Distributed Geoinformatics and Sensing, Ubiquity, and Mobility (DG/SUM07), Melbourne, Sep 19, 2007

• R.Chernich, J.Hunter, A.Davies, "Simple Tools for Generating a Searchable Repository of Access Grid Sessions" , Australian Partnership for Advanced Computing Conference, APAC 07, Perth, Oct 8-12, 2007

• R. Chernich, J. Hunter, A. Davies, "Virgil - Providing Institutional Access to a Repository of Access Grid Sessions", 11th European Conference on Digital Libraries ECDL 2007, Budapest, September 16-21, 2007

• R. Schroeter, J. Hunter. "Annotating Relationships between Multiple Mixed-media Digital Objects by Extending Annotea", European Semantic Web Conference (ESWC) 2007, Innsbruck, 3-7 June, 2007

• R.Schroeter, J.Hunter, J.Guerin, I.Khan, M.Henderson, “A Synchronous Multimedia Annotation System for Secure Collaboratories”, e-Science 2006, Dec 4-6, Amsterdam, Netherlands

• K.Cheung, J.Hunter, “Provenance Explorer – Customized Provenance Views Using Semantic Inferencing”, 5th International Semantic Web Conference, ISWC 2006, Athens, Georgia, November 2006

• J. Drennan, R. Webb, K. Nogita, R. Knibbe, G. Auchterlonie, K Tatenuma and J. Hunter, Analytical electron microscopy of proton exchange membrane fuel cells, Proceedings of the 15th International Conference on Solid State Ionics, vol 177, pp 1649-1654, October 2006

• K.Cheung, J.Hunter, “Provenance Explorer – A Tool for Viewing Provenance Trails and Constructing Scientific Publication Packages”, ECDL 2006, 10th European Conference on Digital Libraries, DLSci (Digital Library goes eScience) workshop, Alicante, Spain, Sept, 2006

• I.Khan, R.Schroeter, J.Hunter, “Implementing a Secure Annotation Service”, International Provenance and Annotation Workshop, Chicago, Illinois, USA, May 3-5, 2006

• S.Jeffrey, J.Hunter, “A Semantic Search Engine for the Storage Resource Broker”, 3rd Semantic Grid Workshop, GGF16, Athens, Feb 15, 2006

• J.Hunter, “Scientific Models – A user-oriented approach to integrating scientific data and digital libraries”, VALA 2006, Melbourne, February, 2006

• L.Hollink, S.Little, J.Hunter, “Evaluating The Application of Semantic Inferencing Rules to Image Annotation”, Third International Conference on Knowledge Capture, KCAP ’05, Oct 2-5, 2005, Banff, Canada

• J. Hunter, K. Cheung. "Generating eScience Workflows from Statistical Analysis of Prior Data", APAC'05, Royal Pines Resort, Gold Coast Sept 26-29 2005

• J.Hunter, K.Cheung, S.Little, J.Drennan, “FUSION – A Knowledge Management System for Fuel Cell Optimization”, accepted International Conference on Solid State Ionics, Baden Baden, July 2005

• J.Hunter, S.Choudhury, “Semi-Automated Preservation and Archival of Scientific Data using Semantic Grid Services”, Semantic Infrastructure for Grid Computing Applications Workshop, CCGRid 2005, Cardiff, May 2005;

• S.Little, J.Hunter, "Rules-By-Example - A Novel Approach to Semantic Indexing and Querying of Images",  International Semantic Web Conference ISWC 2004, Hiroshima, Nov 2004;

• J. Hunter, K. Falkovych, S. Little, "Next Generation Search Interfaces - Interactive Data Exploration and Hypothesis Formulation", European Conference on Digital Libraries ECDL 2004, Sept 2004;

• J.Hunter, R.Schroeter, B.Koopman, M.Henderson, "Using the Grid to Build Bridges between Museums and Indigenous Communities", 11th Global Grid Forum, Semantic Grid Applications Workshop, Honolulu, June 2004;

• J.Hunter, S.Choudhury, "A Semi-Automated Digital Preservation System Based on Semantic Web Services", Joint Conference for Digital Libraries, Joint Conference on Digital Libraries JCDL 2004, Tucson, Arizona, June 2004;

• R.Schroeter, J.Hunter, D.Kosovic, "The FilmEd Project - Collaborative Annotation and Discussion Tools for Film/Video Over Broadband Networks", 10th International Multimedia Modelling Conference MMM2004, Jan 2004, Brisbane;

• R.Schroeter, J.Hunter, D.Kosovic, “Vannotea – A Collaborative Video Indexing, Annotation and Discussion System for Broadband Networks”, Knowledge Markup and Semantic Annotation Workshop, K-CAP 2003, Sanibel, Florida Oct 2003

• J. Hunter, S.Choudhury, “Implementing Preservation Strategies for Complex Multimedia Objects”, The Seventh European Conference on Research and Advanced Technology for Digital Libraries, ECDL 2003, Trondheim, August 2003

• J.Hunter, B.Koopman, J.Sledge, “Software Tools for Indigenous Knowledge Management“, Museums and the Web 2003, Charlotte, March 2003

• S.Little, J. Guerts, J. Hunter, “The Dynamic Generation of Intelligent Multimedia Presentations through Semantic Inferencing", 6th European Conference on Research and Advanced Technology for Digital Libraries, ECDL 2002, Rome, September 2002

• S.Little and J. Hunter, "A Tool for Creating, Editing and Tracking Virtual SMIL Presentations", EdMedia 2002 Conference, Denver June 2002

• J. Hunter, “Rights Markup Extensions for the Protection of Indigenous Knowledge”, Global Communities Track, Eleventh International World Wide Web Conference WWW 2002, Honolulu, May 2002

• J.Hunter, "Combining the CIDOC/CRM and MPEG-7 to Describe Multimedia in Museums", Museums and the Web 2002, Boston, April 2002

• C. Lagoze, J.Hunter, "The ABC Ontology and Model (v2.0)", DC-2001, International Conference on Dublin Core and Metadata, Tokyo, October 2001

• J. Hunter, S. Little, "Building and Indexing a Distributed Multimedia Presentation Archive using SMIL", 5th European Conference on Research and Advanced Technology for Digital Libraries, ECDL '01, Darmstadt, September 2001.

• J. Hunter, "Adding Multimedia to the Semantic Web - Building an MPEG-7 Ontology", International Semantic Web Working Symposium (SWWS), Stanford, July 30 - August 1, 2001

• J. Hunter, C. Lagoze, "Combining RDF and XML Schemas to Enhance Interoperability Between Metadata Application Profiles", Tenth International World Wide Web Conference WWW10, HongKong, May 2001

• D.James, J.Hunter, "A Streamlined System for Building Online Presentation Archives Using SMIL", Australian Computing Education Conference ACE 2000, Melbourne, December 2000

• J. Hunter, D. James, "The Application of an Event-Aware Metadata Model to an Online Oral History Project", 4th European Conference on Research and Advanced Technology for Digital Libraries ECDL 2000, Lisbon, Sept 2000

• C.Lagoze, J. Hunter, D. Brickley, "An Event-Aware Model for Metadata Interoperability", 4th European Conference on Research and Advanced Technology for Digital Libraries ECDL 2000, Lisbon, Sept 2000

• J. Hunter, Z. Zhan, "An Indexing and Querying System for Online Images Based on the PNG Format and Embedded Metadata", ARLIS/ANZ Conference, Brisbane, Australia, September 1999.

• J. Hunter, J. Newmarch, "An Indexing, Browsing, Search and Retrieval System for Audiovisual Libraries", Third European Conference on Research and Advanced Technology for Digital Libraries, ECDL '99, 22-24 September, Paris.

• J. Hunter, L. Armstrong, "A Comparison of Schemas for Video Metadata Representation", WWW8, Toronto, May 10-14, 1999

• J. Hunter, "The Application of Metadata Standards to Multimedia In Museums", CIDOC '98 Conference, 10-14 October , Melbourne

• J. Hunter, R. Iannella, "The Application of Metadata Standards to Video Indexing", Second European Conference on Research and Advanced Technology for Digital Libraries ECDL'98, 19 - 23 September, 1998, Crete, Greece

Book

• A. Bitterer, A. Godulla, J. Hunter, S. ison, L. Montorio, "Digital Library for Windows NT; Building a Collection Treasury Application", IBM Redbook, SG24-5555-00, Feb 1998

PhD Thesis

• Integrated Sound Synchronisation for Computer Animation, PhD Thesis, University of Cambridge Computer Lab, Sept 1994