Geard, N. (2006). Two design patterns for visualising the parameter space of complex systems. Technical report for the ARC Centre for Complex Systems.
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Wiles, J., Watson, J. (2005). Patterns in complex systems modeling. Lecture Notes in Computer Science, Vol. 3578 (June), pp. 532-539.
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Geard, N., Willadsen, K., & Wiles, J., (2005). Perturbation Analysis: A Complex Systems Pattern. In Abbass, H.A., Bossamaier, T., & Wiles, J. (Eds), Recent Advances in Artificial Life, Vol. 3 of Advances in Natural Computation, pp. 69-84. World Scientific.
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Watson, J., Hawkins, J., Bradley, D., Dassanayake, D., Wiles, J. & Hanan, J. (2005). Towards a network pattern language for complex systems. In Abbass, H.A., Bossamaier, T., & Wiles, J. (Eds), Recent Advances in Artificial Life, Vol. 3 of Advances in Natural Computation, pp. 309-317,349-358. World Scientific.
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Wiles, J., Geard, N., Watson, J., Willadsen, K., Mattick, J., Bradley, D., and Hallinan, J.. There's more to a model than code: understanding and formalizing in silico modeling experience. Presented at the Workshop on Scalable, Evolvable, Emergent Design and Developmental Systems (SEEDS) at The Genetic and Evolutionary Computation Conference, GECCO 2005, Washington D C, USA June 2005.
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Gamma, E., Helm, R., Johnson, R., and Vlissides, J. (1995). Design Patterns: Elements of Reusable Object-Oriented Software. Addison Wesley.

Appleton, B. (2000). Patterns and Software: Essential Concepts and Terminology.  PDF

Watson, J., Hanan, J., and Wiles, J. (2004). Practical Software Engineering Techniques for Regulatory Models in Biology. Technical report for the ARC Centre for Complex Systems.
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